Cell Painting App:

No Coding,

Just Results

Fast evaluation of multi-well plate images with 5 to 8 different channels.

Our Cell Painting App is a robust and highly efficient image analysis solution based on image segmentation and feature extraction.

Deep learning-powered accuracy of the Cell Painting App

Accessibility is the key

Experience a fully-automated, and cloud-based solution for Cell Painting, eliminating the need for coding expertise. Our robust deep learning model ensures reproducible and consistent results, accelerating biological insights from high-content data.

App details

Start with high-quality analysis for reliable research

Use data on segmented and quantified cells, nuclei and cytoplasm in each image. 1917 features are extracted for you to gain deep insights into the morphological and functional characteristics of the analyzed cells.

Output files

Start with high-quality analysis for reliable research

Output files

Get the most out of your multichannel images

Automatically evaluate multi-well plate, multichannel images using five fluorescent dyes, in the same field of view. Additionally, three extra channels are optionally supported for analysis.

Input data

Customize analysis with precision using Regions of Interest

Specify one or multiple Regions of Interest (ROIs) to reduce the analysis time.

ROI management

Customize analysis with precision using Regions of Interest

Specify one or multiple Regions of Interest (ROIs) for performing the analysis.

ROI management

Ready for deep cell insights? Discover 1917 object features!

Our Cell Painting App offers comprehensive information into the morphological and functional characteristics of the analyzed cells.

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Created in synergy with Core Life Analytics

We collaborated with Core Life Analytics, a leading provider of high content analysis solutions, to develop a fast and automated image analysis solution. This solution doesn’t require coding and employs a computer vision approach that overcomes the challenges associated with conventional threshold-based methods.

Victor Wong

Chief Scientific Officer at Core Life Analytics

“As scientific questions get bigger and more complex, there is an increasing demand for easy-to-use analytics tools. Taken together, our solutions provide scientists the right tools for the job: platforms wherein one can easily apply AI-assisted quantitative analyses of images and numbers in a reproducible fashion. Tedious analytical tasks can
now be replaced by a click on a button!”

The Cell Painting App works seamlessly with Core Life Analytics’ StratoMineR software

Analyze your IKOSA Cell Painting data in StratoMineR, and easily investigate and compare phenotypic profiles.

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Discover the Cell Painting App in research

The results show that the IKOSA AI model is reproducible and yields consistent outcomes with publicly available JUMP-CP numeric data

Harnessing and Validating Deep Learning-based Image Analysis for Cell Painting as an Unbiased Approach to Phenotypic Drug Discovery

The field of target and drug discovery is rapidly embracing high-content (HC) image-based methods, such as Cell Painting. To address the complexity of tools like CellProfiler, we've introduced IKOSA AI, a user-friendly deep learning-based computer vision tool. IKOSA...

How to Successfully Conduct Morphological Cell Profiling With The Cell Painting Assay

The Cell Painting Assay provides researchers with a powerful tool for morphological cell profiling, enabling investigations into cellular behavior and the effect of therapeutic compounds on cellular structures. In this article, we explore the principles and...

Learning From the JUMP CP Pilot Data: Insights for Platform Development

Together with Core Life Analytics, we have embarked on a collaborative project at the forefront of target and drug discovery. IKOSA and StratoMineR provide a comprehensive solution for analyzing, visualizing, and prioritizing features within the JUMP CP dataset. By...

A Fast Approach for Fully-Automated Cell Painting Image Analysis and Feature Extraction from Raw Image Data

In this innovative collaboration with Core Life Analytics we aim to transform cell profiling and reproducible morphological profiling in the pursuit of advanced drug discovery. Our companies are driven by a shared vision to make cell profiling easily accessible to...